Tutorials
Links
CHARMM. Molecular Dynamics Simulations
http://www.ch.embnet.org/MD_tutorial/
Introduction with applications through the CHARMM program.
Molecular Dynamics
http://cmm.info.nih.gov/modeling/guide_documents/molecular_dynamics_document.html
A tutorial published by the Center for Molecular Modeling of the U.S. National Institutes of Health.
Molecular Dynamics Simulations of Polymers: An Introduction
http://www.che.utah.edu/~gdsmith/tutorials/tutorial1.ppt
Introduction with emphasis on polymer applications; powerpoint presentation.
Topics on Protein Dynamics
http://www.orcero.org/irbis/md/
Includes sections on molecular dynamics: introduction, advanced topics and output analysis.
Molecular Dynamics and Nanotechnology Tutorial Overheads
http://www.mse.ncsu.edu/CompMatSci/Tutorial/
Analytic Potentials and Molecular Dynamics Simulation by Donald W. Brenner. Part of the tutorial on Critical Enabling Technologies for Nanotechnology, Fifth Foresight Conference on Molecular Nanotechnology, November 5, 1997.