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Science: Chemistry: Software: Structural: Visualization




Top > Science > Chemistry > Software > Structural > Visualization

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OpenScience

http://www.openscience.org/links.php?section=56

A directory of links to free molecule viewers and editors.

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DTMM

http://www.polyhedron.co.uk/dtmm/dtmm.html

Desktop Molecular Modeller: A simple program for constructing and viewing small molecules and proteins in 3D with some energy calculation/minimization capabilities. Run on any PC with Windows 9X/NT. Commercial software.

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Grasp

http://honiglab.cpmc.columbia.edu/grasp/

A visualization and analysis program useful for the display and manipulation of the surfaces of molecules and their electrostatic properties. Commercial software.

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OpenRasMol

http://www.openrasmol.org/

Provided for the convenience of users and software developers of open source versions of RasMol.

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Swiss-PdbViewer

http://www.expasy.ch/spdbv/mainpage.html

A free program for viewing and analyzing several proteins at the same time. Some energy minimzation and homology modeling features are also included.

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VMD

http://www.ks.uiuc.edu/Research/vmd/

A free program for visualization and analysis of biological systems such as proteins, nucleic acids, and lipid bilayer assemblies.

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Molymod Molecular Models

http://www.molecular-model.com/

Plastic molecular models for use in chemistry, biochemistry, molecular biology (DNA double helix), semiconductors and crystal lattice structures.

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Labquip

http://www.labquip.clara.net/index.html

Plastic molecular models for constructing polypeptides and DNA molecules.

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Historical Molecular Graphics

http://www.umass.edu/molvis/francoeur/movgallery/moviegallery.html

Digitized versions of 16mm movies of molecular structures produced in the early days of interactive molecular graphics.

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Ymol

http://www.teoroo.mkem.uu.se/daniels/ymol.html

A free molecular visualization and animation program for the X window system. Creates images and movies, using either the built in renderer or povray. Still alpha.

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Pymol

http://www.pymol.org

A free and flexible molecular graphics and modelling package which can be also used to generate animated sequences.

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ProteinScope

http://www.proteinscope.com

ProteinScope is a free program to view and create animations of Protein Data Bank PDB files.

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Biodesigner and iMol

http://www.pirx.com/

A molecular viewer for Windows9x systems with sequence editor and protein builder. Free for academic use. Additionaly the iMol molecule viewer is available for Mac OS X systems.

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RasMol

http://www.umass.edu/microbio/rasmol/

Molecular visualization freeware for proteins, DNA, and macromolecules. Freely available for Windows, Macintosh, and UNIX.

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Molcular Model Kits

http://www.hgs-model.com/

Plastic molecular structure models for research and education in science, intended especially for biochemistry.

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Molda

http://www.molda.org/

A molecular model building program for displaying data from MM2, MOPAC, Gaussian94, charmm and amber4 outputs. Supported on most windows, mac and unix platforms.

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Category for: Science: Chemistry: Software: Structural: Visualization