Physical and Theoretical
Links
Thermodynamic Modeling
About equilibrium composition, thermodynamic modeling, thermodynamic properties of substances, real gas properties, and computational thermodynamics.
CHEMKIN Collection Software
Simulates complex chemical kinetics in reacting flow.
ADF
ADF, the Amsterdam Density Functional program for the treatment of complex chemical problems.
MOMix and ALP-Vibro
http://www.chem.yorku.ca/grad/SG/momix.htm
Programs for Quantum Chemistry. MOMix (electron population analysis). ALP-vibro (animation of molecular vibrations). Spectrum Wizard.
Spectra
http://chemistry.anl.gov/downloads/spectra/
Windows program for the interactive analysis of crystal field spectra of f-block elements.
WebMO
Web interface for the quantum chemistry packages MOPAC, Gaussian, and GAMESS. Free version available for download; pro version also available.
Zeta Potential
http://zeta-potential.sourceforge.net/
Zeta is a free (GPL) computer program which can be used to calculate the zeta potentials.
Gamess
http://www.msg.ameslab.gov/GAMESS/GAMESS.html
An ab initio quantum chemistry package GAMESS. Developed by the Mark Gordon research group at Iowa State University. Site is not GAMESS-Uk.
ArgusLab
http://www.planaria-software.com/
A free molecular modeling program for Windows9x operating systems with 3D-builder, various ab initio calculation modules and simple molecular mechanics.
YAeHMOP
http://yaehmop.sourceforge.net/
"Yet Another extended Huckel Molecular Orbital Package". Performs calculations and visualization for both molecular and extended materials in 1, 2, or 3 dimensions. Freely available in source form.
CONFLEX2000
Commercial conformational searching and analysis tools for Linux, Mac OS X, and Windows. Compatible w/CAChe, ChemOffice, and Amber. Screen shots, data sheet, ordering, and trial versions available.
CRYSTAL Home Page
Unix program to compute the electronic structure of periodic systems within Hartree Fock, density functional or various hybrid approximations. Documentation, licensing, and downloads available.
Extensible Computational Chemistry Environment
Graphical user interface for Linux/Solaris/IRIX with visualization tools and a data management framework for setting up, submitting, and analyzing computational chemistry calculations.
GaussSum
http://gausssum.sourceforge.net/
Collection of Python scripts which parse the output of Gaussian or GAMESS calculations to extract information such as the progress of the SCF cycles, geometry optimisation, UV-Vis/IR/Raman spectra, MO levels, and MO contributions.
CHEAQS
Free windows program for calculating chemical equilibria in aquatic systems. CHEAQS solves speciation problems and includes a customizable database of equilibrium constants.
Environment-Dependent Interatomic Potential (EDIP)
http://www-math.mit.edu/~bazant/EDIP/
Codes in C and Fortran by Martin Z. Bazant to model interatomic forces in covalent solids and liquids which incorporates recent theoretical advances in understanding the environment-dependence of (sigma) chemical bonding in condensed phases.
AOMix
A program for molecular orbital analysis. It calculates the MO compositions of the constituent chemical fragments from the output files of various quantum-chemical packages, analyzes chemical bonding using overlap populations, and generates density-of-states spectra. License required.
Moloc
Molecular Design Software Suite for Irix, Linux, and Windows. Includes features such as structure generation, molecular mechanics, conformational search, molecular dynamics, and similarity analysis. Free for academic users.
CASTEP - CAmbridge Serial Total Energy Package
http://www.tcm.phy.cam.ac.uk/castep/
Uses density functional theory to provide an atomic-level description of materials and molecules.